Structure of PDB 6o3m Chain Y6
Receptor sequence
>6o3mY6 (length=53) Species:
300852
(Thermus thermophilus HB8) [
Search protein sequence
]
ASEVRIKLLLECTECKRRNYATEKNKRNTPNKLELRKYCPWCRKHTVHRE
VKI
3D structure
PDB
6o3m
Structural insights into mRNA reading frame regulation by tRNA modification and slippery codon-anticodon pairing.
Chain
Y6
Resolution
3.97 Å
3D
structure
[
Spin on
]
[
Spin off
]
[
Reset orientation
]
[
High quality
]
[
Low quality
]
[
White background
]
[
Black background
]
[
Download
]
[
Download structure with residue number starting from 1
]
Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
Y6
S3 R6 K8 R18 R19 Y21 T23 E24 N26 N29 L36 R37 K38 Y39 R44 H46 I54
S2 R5 K7 R17 R18 Y20 T22 E23 N25 N28 L35 R36 K37 Y38 R43 H45 I53
BS02
ZN
Y6
C13 C16 C40 C43
C12 C15 C39 C42
Gene Ontology
Molecular Function
GO:0000049
tRNA binding
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6o3m
,
PDBe:6o3m
,
PDBj:6o3m
PDBsum
6o3m
PubMed
33016876
UniProt
P35871
|RL33_THET8 Large ribosomal subunit protein bL33 (Gene Name=rpmG)
[
Back to BioLiP
]