Structure of PDB 4l71 Chain Y1

Receptor sequence
>4l71Y1 (length=97) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
SKVCEISGKRPIVANSIQRRGKAKREGGVGKKTTGISKRRQYPNLQKVRV
RVAGQEITFRVAASHIPKVYELVERAKGLKLEGLSPKEIKKELLKLL
3D structure
PDB4l71 Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops.
ChainY1
Resolution3.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Y1 S2 K3 K10 I13 V14 A15 N16 Q19 R20 K25 V30 K33 T34 T35 K39 R40 R41 Q42 Y43 P44 N45 Q47 R50 R52 R61 S65 H66 K69 K78 K88 L97 S1 K2 K9 I12 V13 A14 N15 Q18 R19 K24 V29 K32 T33 T34 K38 R39 R40 Q41 Y42 P43 N44 Q46 R49 R51 R60 S64 H65 K68 K77 K87 L96
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:4l71, PDBe:4l71, PDBj:4l71
PDBsum4l71
PubMed25128388
UniProtP60494|RL28_THET8 Large ribosomal subunit protein bL28 (Gene Name=rpmB)

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