Structure of PDB 8a3l Chain Y

Receptor sequence
>8a3lY (length=172) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
FAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFK
NAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYED
AETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEF
KVIKLDQKRNNVVVSRRAVIES
3D structure
PDB8a3l Structural insights into the binding of bS1 to the ribosome.
ChainY
Resolution3.42 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Y K117 G118 F120 K113 G114 F116
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003727 single-stranded RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0010501 RNA secondary structure unwinding
GO:2000766 negative regulation of cytoplasmic translation
GO:2000767 positive regulation of cytoplasmic translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0016020 membrane
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8a3l, PDBe:8a3l, PDBj:8a3l
PDBsum8a3l
PubMed36840711
UniProtP0AG67|RS1_ECOLI Small ribosomal subunit protein bS1 (Gene Name=rpsA)

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