Structure of PDB 6uki Chain Y

Receptor sequence

>6ukiY (length=258) Species: 735 (Haemophilus parahaemolyticus) [Search protein sequence]

MNWKEFEVFCVTYLNKTYGNKFAKKGESDSTTSDILFTGNNPFYIEAKMP
HSQCGQFVLIPNRAEYKFDYSPKNKSEINPYTQKIMQFMSENFSEYANLS
TKGKIIPLPESVFVNWIKEYYKSKSVKFFITSNGDFIIFPIEHFEHYFNV
SCTYRIKKSGSRHLNSKSLPDFKQALDKKGISYTMRGLELHSDENIHDKR
ISGDDKDFLIKENNGAYHVKILSNTFNANVIFSISLKNNISLFILNEDRK
AFEAAISL

3D structure

PDB

6uki Structure of HhaI endonuclease with cognate DNA at an atomic resolution of 1.0 angstrom.

Chain

Resolution

2.7 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	dna	Y	N2 W3 D34 M49 H51 S52 Q53 Q56 V58 S71 K73 N74 Y120 K157 S159 G160 R162 T225 N227	N2 W3 D34 M49 H51 S52 Q53 Q56 V58 S71 K73 N74 Y120 K157 S159 G160 R162 T225 N227
BS02	dna	Y	S28 T31 K75 T101 K102 R155 K157 K158 S159 G160 S161 K211 K220 L222	S28 T31 K75 T101 K102 R155 K157 K158 S159 G160 S161 K211 K220 L222
BS03	CA	Y	D34 E46 A47	D34 E46 A47

External links

PDB	RCSB:6uki, PDBe:6uki, PDBj:6uki
PDBsum	6uki
PubMed	31879785

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