Structure of PDB 5uq8 Chain Y

Receptor sequence
>5uq8Y (length=107) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
MRVKMHVKKGDTVLVASGKYKGRVGKVKEVLPKKYAVIVEGVNIVKKAVR
VSPKYPQGGFIEKEAPLHASKVRPICPACGKPTRVRKKFLENGKKIRVCA
KCGGALD
3D structure
PDB5uq8 Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel.
ChainY
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Y M1 K4 H6 K8 K9 G18 K19 K21 V30 P32 Y35 K46 K47 A48 V49 R50 G59 F60 H68 S70 K71 R73 R84 R86 K87 K95 M1 K4 H6 K8 K9 G18 K19 K21 V30 P32 Y35 K46 K47 A48 V49 R50 G59 F60 H68 S70 K71 R73 R84 R86 K87 K95
BS02 ZN Y C76 C79 C99 C76 C79 C99
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5uq8, PDBe:5uq8, PDBj:5uq8
PDBsum5uq8
PubMed29456023
UniProtQ5SHP9|RL24_THET8 Large ribosomal subunit protein uL24 (Gene Name=rplX)

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