Structure of PDB 5afi Chain Y

Receptor sequence
>5afiY (length=63) Species: 562 (Escherichia coli) [Search protein sequence]
MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDV
ARVKTLLNEKAGA
3D structure
PDB5afi Structure of the E. coli ribosome-EF-Tu complex at <3 angstrom resolution by Cs-corrected cryo-EM.
ChainY
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Y K2 Q39 S40 H41 K44 R47 R48 A51 R52 K54 T55 N58 K2 Q39 S40 H41 K44 R47 R48 A51 R52 K54 T55 N58
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5afi, PDBe:5afi, PDBj:5afi
PDBsum5afi
PubMed25707802
UniProtP0A7M6|RL29_ECOLI Large ribosomal subunit protein uL29 (Gene Name=rpmC)

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