Structure of PDB 3jb9 Chain Y

Receptor sequence
>3jb9Y (length=261) Species: 284812 (Schizosaccharomyces pombe 972h-) [Search protein sequence]
PARKQIETRPEYEMEPEQPGQVYNLWYNKWSGGMRQDPLKSQVKSETRCV
ISRDSGYTKADKNPGSFFCLYFARGMCSEGSKCEYLHRLPKDTDFFNANV
DCFGREKHADYRDDMGGVGSFLRQNYTLYVGGITPTDDIEEIVSRHFAEW
GDIERIRVLNSRGIAFITYLNEANAQFAKEAMAHQSLECLNVRWATTDPN
PASQARNQRRLEERAANAVKKLLPKQFLLDLEETKNGKAAAAAAAAAAAA
AAAAAAAAAAA
3D structure
PDB3jb9 Structure of a yeast spliceosome at 3.6-angstrom resolution
ChainY
Resolution3.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna Y R57 Y60 Y71 Y75 N76 R83 Q90 V91 C117 L118 Y119 S126 Y133 F151 R153 H156 Y159 R160 V166 H232 N242 V243 R244 R9 Y12 Y23 Y27 N28 R35 Q42 V43 C69 L70 Y71 S78 Y85 F103 R105 H108 Y111 R112 V118 H184 N191 V192 R193
BS02 ZN Y C117 C125 H135 C69 C77 H87
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:3jb9, PDBe:3jb9, PDBj:3jb9
PDBsum3jb9
PubMed26292707
UniProtP87126|CWC2_SCHPO Pre-mRNA-splicing factor cwf2 (Gene Name=cwf2)

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