Structure of PDB 2zjs Chain Y

Receptor sequence
>2zjsY (length=415) Species: 274 (Thermus thermophilus) [Search protein sequence]
MVKAFWSALQIPELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKIQEFLRT
AQGGVFGIINLFSGGNFERFSIFALGIMPYITAAIIMQILVTVVPALEKL
SKEGEEGRRIINQYTRIGGIALGAFQGFFLATAFLGAEGGRFLLPGWSPG
PFFWFVVVVTQVAGIALLLWMAERITEYGIGNGTSLIIFAGIVVEWLPQI
LRTIGLIRTGEVNLVAFLFFLAFIVLAFAGMAAVQQAERRIPVQYARYGG
QATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQDNPVLQGIANFFNPT
RPSGLFIEVLLVILFTYVYTAVQFDPKRIAESLREYGGFIPGIRPGEPTV
KFLEHIVSRLTLWGALFLGLVTLLPQIIQNLTGIHSIAFSGIGLLIVVGV
ALDTLRQVESQLMLR
3D structure
PDB2zjs Conformational transition of Sec machinery inferred from bacterial SecYE structures
ChainY
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN Y E138 D293 E138 D286
Gene Ontology
Molecular Function
GO:0005048 signal sequence binding
GO:0008320 protein transmembrane transporter activity
Biological Process
GO:0006605 protein targeting
GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation
GO:0015031 protein transport
GO:0043952 protein transport by the Sec complex
GO:0065002 intracellular protein transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0031522 cell envelope Sec protein transport complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2zjs, PDBe:2zjs, PDBj:2zjs
PDBsum2zjs
PubMed18923527
UniProtQ5SHQ8|SECY_THET8 Protein translocase subunit SecY (Gene Name=secY)

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