Structure of PDB 6oxi Chain XY

Receptor sequence
>6oxiXY (length=84) Species: 562 (Escherichia coli) [Search protein sequence]
MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFEGKGKPEPLKH
NLSGFWSRRITEEHRLVYAVTDDSLLIAACRYHY
3D structure
PDB6oxi Monomeric YoeB toxin retains RNase activity but adopts an obligate dimeric form for thermal stability.
ChainXY
Resolution3.495 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna XY R22 K26 E29 K42 G43 E46 P47 K49 R59 E62 R22 K26 E29 K42 G43 E46 P47 K49 R59 E62
BS02 rna XY E46 L48 K49 N51 R65 H83 Y84 E46 L48 K49 N51 R65 H83 Y84
BS03 rna XY F39 P47 W56 T71 F39 P47 W56 T71
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
Biological Process
GO:0006401 RNA catabolic process
GO:0098795 global gene silencing by mRNA cleavage

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Molecular Function
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Biological Process
External links
PDB RCSB:6oxi, PDBe:6oxi, PDBj:6oxi
PDBsum6oxi
PubMed31501867
UniProtJ7QFC0

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