Structure of PDB 7a5k Chain X3

Receptor sequence
>7a5kX3 (length=243) Species: 9606 (Homo sapiens) [Search protein sequence]
PLHKYPVWLWKRLQLREGICSRLPGHYLRSLEEERTPTPVHYRPHGAKFK
INPKNGQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRL
KKVWKPQLFEREFYSEILDKKFTVTVTMRTLDLIDEAYGLDFYILKASGE
DLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEFAIPEEEA
EWVGLTLEEAIEKQRLLEEKDPVPLFKIYVAELIQQLQQQALS
3D structure
PDB7a5k Elongational stalling activates mitoribosome-associated quality control.
ChainX3
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna X3 L3 K5 Y6 L14 K55 P73 L87 G88 Y91 K96 L97 S98 K99 L101 K102 K103 W105 K106 Q108 F110 R112 L2 K4 Y5 L13 K54 P72 L86 G87 Y90 K95 L96 S97 K98 L100 K101 K102 W104 K105 Q107 F109 R111
BS02 rna X3 D95 K96 L97 D94 K95 L96
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005761 mitochondrial ribosome
GO:0005762 mitochondrial large ribosomal subunit
GO:0005829 cytosol
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:7a5k, PDBe:7a5k, PDBj:7a5k
PDBsum7a5k
PubMed33243891
UniProtQ13084|RM28_HUMAN Large ribosomal subunit protein bL28m (Gene Name=MRPL28)

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