Structure of PDB 8vct Chain X

Receptor sequence

>8vctX (length=310) Species: 562 (Escherichia coli) [Search protein sequence]

MRNFPVPYSNELIYSTIARAGVYQGIVSPKQLLDEVYGNRKVVATLGLPS
HLGVIARHLHQTGRYAVQQLIYEHTLFPLYAPFVGKERRDEAIRLMEYQA
QGAVHLMLGVAASRVKSDNRFRYCPDCVALQLNRYGEAFWQRDWYLPALP
YCPKHGALVFFDRAVDDHRHQFWALGHTELLSDYPKDSLSQLTALAAYIA
PLLDAPRAQELSPSLEQWTLFYQRLAQDLGLTKSKHIRHDLVAERVRQTF
SDEALEKLDLKLAENKDTCWLKSIFRKHRKAFSYLQHSIVWQALLPKLTV
IEALQQASAL

3D structure

PDB

8vct Assembly of the Tn7 targeting complex by a regulated stepwise process.

Chain

Resolution

3.83 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	dna	X	R114 H236 R276 R279	R114 H236 R276 R279
BS02	ZN	X	C124 C152 H155	C124 C152 H155

External links

PDB	RCSB:8vct, PDBe:8vct, PDBj:8vct
PDBsum	8vct
PubMed	38834067
UniProt	P13991\|TNSD_ECOLX Transposon Tn7 transposition protein TnsD (Gene Name=tnsD)

[Back to BioLiP]