Structure of PDB 8uqm Chain X

Receptor sequence
>8uqmX (length=116) Species: 562 (Escherichia coli) [Search protein sequence]
ARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEG
QIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQR
TKTNARTRKGPRKPIK
3D structure
PDB8uqm Escherichia coli transcription-translation coupled complex class A (TTC-A) containing RfaH bound to ops signal, mRNA with a 21 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
ChainX
Resolution5.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna X K13 V25 G26 T28 R29 R87 R93 R98 Q100 R101 T102 K103 T104 N105 R107 K110 R113 K12 V24 G25 T27 R28 R86 R92 R97 Q99 R100 T101 K102 T103 N104 R106 K109 R112
BS02 rna X K78 M81 R92 K77 M80 R91
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8uqm, PDBe:8uqm, PDBj:8uqm
PDBsum8uqm
PubMed39117885
UniProtA0A7U9IV78

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