Structure of PDB 8d8l Chain X

Receptor sequence
>8d8lX (length=96) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
MNVPKARLLKVAELSAKIFDQNFNPSGIRTGSKILNERLKGPSVASYYGN
PDILKFRHLKTLYPDIEFVDLEEQYRLSMVEAKKRRGKGAPKKMKK
3D structure
PDB8d8l Principles of mitoribosomal small subunit assembly in eukaryotes.
ChainX
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna X Q21 N22 N24 G27 I28 R29 T30 S32 R38 K40 S43 V44 R57 T61 E73 Y75 R76 M79 K84 R86 K88 P91 K93 M94 K95 Q21 N22 N24 G27 I28 R29 T30 S32 R38 K40 S43 V44 R57 T61 E73 Y75 R76 M79 K84 R86 K88 P91 K93 M94 K95
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0032543 mitochondrial translation
Cellular Component
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8d8l, PDBe:8d8l, PDBj:8d8l
PDBsum8d8l
PubMed36482135
UniProtP53305|RT27_YEAST Small ribosomal subunit protein mS33 (Gene Name=RSM27)

[Back to BioLiP]