Structure of PDB 8bf9 Chain X

Receptor sequence

>8bf9X (length=119) Species: 9940 (Ovis aries) [Search protein sequence]

KKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAM
KKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAY
VRLAPDYDALDVANKIGII

3D structure

PDB

8bf9 Molecular view of ER membrane remodeling by the Sec61/TRAP translocon.

Chain

Resolution

2.69 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	X	K38 P44 T45 R47 R48 P49 K50 T51 R53 T83 K89 N93 N105 K106 H107 K123 N125 T126 L127 I128 P130 K134 K135 Y137 R139	K1 P7 T8 R10 R11 P12 K13 T14 R16 T46 K52 N56 N68 K69 H70 K86 N88 T89 L90 I91 P93 K97 K98 Y100 R102
BS02	rna	X	R56 K63 P66 R67 R68 N69 K70 H107 Q108	R19 K26 P29 R30 R31 N32 K33 H70 Q71

Gene Ontology

	Molecular Function
GO:0003674	molecular_function
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding
GO:1904841	TORC2 complex binding

	Biological Process
GO:0000027	ribosomal large subunit assembly
GO:0006412	translation
GO:0008150	biological_process

	Cellular Component
GO:0005634	nucleus
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links