Structure of PDB 7syp Chain X

Receptor sequence
>7sypX (length=129) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFE
IIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGF
IVLTTSAGIMDHEEARRKHTGGKILGFFF
3D structure
PDB7syp Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
ChainX
Resolution4.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna X V2 M4 D9 N16 K19 R20 R28 S31 K32 R57 K71 V74 I75 S76 R78 D80 Q82 K88 W89 T105 T106 S107 H120 G122 K124 F128 V1 M3 D8 N15 K18 R19 R27 S30 K31 R56 K70 V73 I74 S75 R77 D79 Q81 K87 W88 T104 T105 S106 H119 G121 K123 F127
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7syp, PDBe:7syp, PDBj:7syp
PDBsum7syp
PubMed35822879
UniProtG1TG89|RS15A_RABIT Small ribosomal subunit protein uS8 (Gene Name=RPS15A)

[Back to BioLiP]