Structure of PDB 7sym Chain X

Receptor sequence
>7symX (length=129) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
VRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFE
IIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGF
IVLTTSAGIMDHEEARRKHTGGKILGFFF
3D structure
PDB7sym Comprehensive structural overview of the HCV IRES-mediated translation initiation pathway
ChainX
Resolution4.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna X V2 R3 M4 D9 K12 N16 K19 R20 K22 R28 C30 S31 K32 H56 R57 K71 V74 I75 S76 D80 Q82 L83 T105 T106 S107 H120 G122 K124 F128 F130 V1 R2 M3 D8 K11 N15 K18 R19 K21 R27 C29 S30 K31 H55 R56 K70 V73 I74 S75 D79 Q81 L82 T104 T105 S106 H119 G121 K123 F127 F129
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:7sym, PDBe:7sym, PDBj:7sym
PDBsum7sym
PubMed
UniProtG1TG89|RS15A_RABIT Small ribosomal subunit protein uS8 (Gene Name=RPS15A)

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