Structure of PDB 6y7c Chain X

Receptor sequence

>6y7cX (length=144) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]

GKGKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKG
IVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDE
VLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS

3D structure

PDB

6y7c Good Vibrations: Structural Remodeling of Maturing Yeast Pre-40S Ribosomal Particles Followed by Cryo-Electron Microscopy.

Chain

Resolution

3.8 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	X	K3 K5 R7 N10 R13 K14 R19 R20 N22 R23 W24 A25 E26 K30 R32 S47 H48 K50 I59 E60 P64 N65 R69 K78 D90 A105 G106 G108 R109 K110 K112 K123 K126 S131 L133	K2 K4 R6 N9 R12 K13 R18 R19 N21 R22 W23 A24 E25 K29 R31 S46 H47 K49 I58 E59 P63 N64 R68 K77 D89 A104 G105 G107 R108 K109 K111 K122 K125 S130 L132

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412	translation
GO:0006450	regulation of translational fidelity
GO:1990145	maintenance of translational fidelity

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:6y7c, PDBe:6y7c, PDBj:6y7c
PDBsum	6y7c
PubMed	32138239
UniProt	P0CX29\|RS23A_YEAST Small ribosomal subunit protein uS12A (Gene Name=RPS23A)