Structure of PDB 6sd8 Chain X

Receptor sequence
>6sd8X (length=503) Species: 264462 (Bdellovibrio bacteriovorus HD100) [Search protein sequence]
NFYQDGPQLSNTFRSDEALQKILKSLLPADAQKVALPHLEHLGERAVTDM
LTWAQEAESQPPVHVPFDPWGRRIDDIKTSHGWKALEKVAAEEGIVATAY
DRRFGAASRVYQMALLYLYSPSSAIFSCPLAMTDGAARALELYADADLKA
RVLPHLLSRDPKTFWTAGQWMTERTGGSDVSGTSTDAHPFTGTSEFGATH
SLHGTKWFTSATTSQMALTLARPDGAAPGSRGLSLFFLELRNDKGELNHI
QIHRLKDKLGTKALPTAELSLQGTPARMIGGVGEGVKRIASVLNITRIYN
SICAVGHIRRALDLAQDYSGKRQAFGKLLKDHPLHKSTLDSLEADFRKCI
AFSFFVANLLGQEEVGEASASEKILLRVLTPILKLYTAKKSIHISSEVVE
MFGGAGYVEDTGIPRLLRDAQVFSIWEGTTNVLSLDMLRAFEKDQAGQIL
EQFLVLNEAGSEELVRLQKLLTLSGEQKEQHAREIAFLIGNAVARIAMKK
YSL
3D structure
PDB6sd8 Target highlights in CASP13: Experimental target structures through the eyes of their authors.
ChainX
Resolution1.51 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) M173 T174 T298 R441
Catalytic site (residue number reindexed from 1) M171 T172 T296 R439
Enzyme Commision number 1.3.99.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD X Q171 M173 T174 G178 G179 S180 F210 T211 W428 T431 V434 L437 Q169 M171 T172 G176 G177 S178 F208 T209 W426 T429 V432 L435
BS02 FAD X R324 F327 L331 H334 M403 G406 R322 F325 L329 H332 M401 G404
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003995 acyl-CoA dehydrogenase activity
GO:0016491 oxidoreductase activity
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors

View graph for
Molecular Function
External links
PDB RCSB:6sd8, PDBe:6sd8, PDBj:6sd8
PDBsum6sd8
PubMed31442339
UniProtQ6MJ59

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