Structure of PDB 6fy3 Chain X

Receptor sequence

>6fy3X (length=178) Species: 9606 (Homo sapiens) [Search protein sequence]

EVQLVQSGAEVKKPGESLKISCKGFGYSFSTYWIAWVRQMPGKGLEWMGM
IYPGDSDTKYSPSLQGQVTISGDKSISTAYLQWSSLKASDTAMYYCARLL
NNYDSSGFLYWYLDLWGRGTLVTVSSASTKGPSGCLVKDYFPEPFPAVLQ
SSGLYSLSSVCNVNHKPSNTKVDKKVEP

3D structure

PDB

6fy3 Common helical V1V2 conformations of HIV-1 Envelope expose the alpha 4 beta 7 binding site on intact virions.

Chain

Resolution

2.6 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	X	W33 M50 Y52 D56 K58 L95 F100D L100E Y100F W100G	W33 M50 Y52 D57 K59 L99 F108 L109 Y110 W111

External links

PDB	RCSB:6fy3, PDBe:6fy3, PDBj:6fy3
PDBsum	6fy3
PubMed	30367034

[Back to BioLiP]