Structure of PDB 5lmp Chain X

Receptor sequence
>5lmpX (length=168) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
KEYLTNERIRAKQVRVVGPDGKQLGIMDTREALRLAQEMDLDLVLVGPNA
DPPVARIMDYSKWRYEQQMAEKEARKKAKRTEVKSIKFRVKIDEHDYQTK
LGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDLKDLAVVEM
KPEMLGRDMNMLLAPVKV
3D structure
PDB5lmp Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
ChainX
Resolution5.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna X K64 Y67 Q70 K74 K86 S87 I88 K89 R91 K93 I94 D95 H97 D98 T101 K102 H105 F109 K62 Y65 Q68 K72 K84 S85 I86 K87 R89 K91 I92 D93 H95 D96 T99 K100 H103 F107
BS02 rna X R91 M121 R123 G124 R125 R89 M119 R121 G122 R123
Gene Ontology
Molecular Function
GO:0003743 translation initiation factor activity
GO:0043022 ribosome binding
Biological Process
GO:0006412 translation
GO:0006413 translational initiation
GO:0032790 ribosome disassembly
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5lmp, PDBe:5lmp, PDBj:5lmp
PDBsum5lmp
PubMed27662086
UniProtQ5SKU2|IF3_THET8 Translation initiation factor IF-3 (Gene Name=infC)

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