Structure of PDB 3q0f Chain X

Receptor sequence
>3q0fX (length=145) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
QIIGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDDGGELVATSIV
SSGGYNDVLDNSDVLIYTGQGGNPPKDQQLVTGNLALKNSINKKNPVRVI
RGIKKNYVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPGQPELPW
3D structure
PDB3q0f A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
ChainX
Resolution2.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.1.1.-
2.1.1.367: [histone H3]-lysine(9) N-methyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna X Y378 R379 Q392 S393 G394 S412 S413 G414 Y416 D418 Y428 T429 Q431 Y486 Y17 R18 Q31 S32 G33 S51 S52 G53 Y55 D57 Y67 T68 Q70 Y107 PDBbind-CN: Kd=8.7uM
External links
PDB RCSB:3q0f, PDBe:3q0f, PDBj:3q0f
PDBsum3q0f
PubMed21245167
UniProtO82175|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 (Gene Name=SUVH5)

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