Structure of PDB 2wva Chain X

Receptor sequence
>2wvaX (length=566) Species: 542 (Zymomonas mobilis) [Search protein sequence]
MSYTVGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLLNKNMEQVYCCNE
LNCGFSAEGYARAKGAAAAVVTYSVGALSAFDAIGGAYAENLPVILISGA
PNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDH
VIKTALREKKPVYLEIACNIASMPCAAPGPASALFNDEASDEASLNAAVE
ETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFADALGGAVATMAAAKSFF
PEENPHYIGTSWGEVSYPGVEKTMKEADAVIALAPVFNDYSTTGWTDIPD
PKKLVLAEPRSVVVNGIRFPSVHLKDYLTRLAQKVSKKTGALDFFKSLNA
GELKKAAPADPSAPLVNAEIARQVEALLTPNTTVIAETGDSWFNAQRMKL
PNGARVEYEMQWGHIGWSVPAAFGYAVGAPERRNILMVGDGSFQLTAQEV
AQMVRLKLPVIIFLINNYGYTIEVMIHDGPYNNIKNWDYAGLMEVFNGNG
GYDSGAGKGLKAKTGGELAEAIKVALANTDGPTLIECFIGREDCTEELVK
WGKRVAAANSRKPVNK
3D structure
PDB2wva Structural Insights Into the Pre-Reaction State of Pyruvate Decarboxylase from Zymomonas Mobilis
ChainX
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) L116 G117 T388 G413 D440 N467 G469 I472 E473
Catalytic site (residue number reindexed from 1) L116 G117 T388 G413 D440 N467 G469 I472 E473
Enzyme Commision number 4.1.1.1: pyruvate decarboxylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TPU X D390 G413 H414 I415 G439 D440 G441 S442 N467 G469 Y470 T471 I472 E473 D390 G413 H414 I415 G439 D440 G441 S442 N467 G469 Y470 T471 I472 E473
BS02 MG X D440 N467 G469 D440 N467 G469
BS03 TPU X A25 E50 V75 H114 A25 E50 V75 H114
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003824 catalytic activity
GO:0004737 pyruvate decarboxylase activity
GO:0016831 carboxy-lyase activity
GO:0030976 thiamine pyrophosphate binding
GO:0046872 metal ion binding
Biological Process
GO:0000949 aromatic amino acid family catabolic process to alcohol via Ehrlich pathway
GO:0019752 carboxylic acid metabolic process
Cellular Component
GO:0005829 cytosol

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Cellular Component
External links
PDB RCSB:2wva, PDBe:2wva, PDBj:2wva
PDBsum2wva
PubMed20099870
UniProtP06672|PDC_ZYMMO Pyruvate decarboxylase (Gene Name=pdc)

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