Structure of PDB 2rbt Chain X

Receptor sequence
>2rbtX (length=292) Species: 307796 (Saccharomyces cerevisiae YJM789) [Search protein sequence]
TLVHVASVEKGRSYEDFQKVYNAIALKLREDDEYDNYIGYGPVLVRLAWH
ISGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEFPWI
SSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDAG
YVRTFFQRLNMNDREVVALMGAHALGKTHLKNSGYEGPGGAANNVFTNEF
YLNLLNEDWKLEKNDANNEQWDSKSGYMMLPTDYSLIQDPKYLSIVKEYA
NDQDKFFKDFSKAFEKLLEDGITFPKDAPSPFIFKTLEEQGL
3D structure
PDB2rbt Rescoring docking hit lists for model cavity sites: predictions and experimental testing.
ChainX
Resolution1.24 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.11.1.5: cytochrome-c peroxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM X R48 W51 P145 D146 A147 L171 M172 A174 H175 G178 K179 T180 H181 N184 S185 L232 R46 W49 P143 D144 A145 L169 M170 A172 H173 G176 K177 T178 H179 N182 S183 L230
BS02 271 X H175 T180 G191 F202 M230 M231 D235 H173 T178 G189 F200 M228 M229 D233
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0020037 heme binding
Biological Process
GO:0006979 response to oxidative stress
GO:0034599 cellular response to oxidative stress

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Molecular Function
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Biological Process
External links
PDB RCSB:2rbt, PDBe:2rbt, PDBj:2rbt
PDBsum2rbt
PubMed18280498
UniProtP00431|CCPR_YEAST Cytochrome c peroxidase, mitochondrial (Gene Name=CCP1)

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