Structure of PDB 6xzb Chain W2

Receptor sequence
>6xzbW2 (length=76) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
TRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTL
FAKADGKVKFEVKGPKNRKFISIEAE
3D structure
PDB6xzb Insights into the improved macrolide inhibitory activity from the high-resolution cryo-EM structure of dirithromycin bound to the E. coli 70S ribosome.
ChainW2
Resolution2.54 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna W2 N12 R14 D15 S16 E17 A18 K19 R20 K24 F26 G27 E29 A33 G34 S35 I36 R39 R41 G42 T43 K44 H46 G54 R55 D56 F60 F69 R77 K78 N3 R5 D6 S7 E8 A9 K10 R11 K15 F17 G18 E20 A24 G25 S26 I27 R30 R32 G33 T34 K35 H37 G45 R46 D47 F51 F60 R68 K69
BS02 rna W2 G73 P74 N76 G64 P65 N67
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome

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Cellular Component
External links
PDB RCSB:6xzb, PDBe:6xzb, PDBj:6xzb
PDBsum6xzb
PubMed32144191
UniProtP0A7L8|RL27_ECOLI Large ribosomal subunit protein bL27 (Gene Name=rpmA)

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