Structure of PDB 8wdu Chain W
Receptor sequence
>8wduW (length=50) Species:
572477
(Allochromatium vinosum DSM 180) [
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SPDLWKIWLLVDPRRILIAVFAFLTVLGLAIHMILLSTAEFNWLEDGVPA
3D structure
PDB
8wdu
High-resolution structure and biochemical properties of the LH1-RC photocomplex from the model purple sulfur bacterium, Allochromatium vinosum
Chain
W
Resolution
2.24 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
UQ8
W
L30 M34
L29 M33
BS02
CRT
W
L30 H33
L29 H32
BS03
BCL
W
F22 H33 W44
F21 H32 W43
BS04
CA
W
W44 D47 V49
W43 D46 V48
BS05
BCL
W
L25 L28 G29 I32 H33 F42
L24 L27 G28 I31 H32 F41
BS06
CRT
W
L18 V21 F24 L25 L28
L17 V20 F23 L24 L27
BS07
CRT
W
K7 I8 L11
K6 I7 L10
Gene Ontology
Molecular Function
GO:0042314
bacteriochlorophyll binding
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
GO:0019866
organelle inner membrane
GO:0030076
light-harvesting complex
GO:0030077
plasma membrane light-harvesting complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8wdu
,
PDBe:8wdu
,
PDBj:8wdu
PDBsum
8wdu
PubMed
38347078
UniProt
D3RP74
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