Structure of PDB 8w51 Chain W

Receptor sequence
>8w51W (length=94) Species: 562 (Escherichia coli) [Search protein sequence]
MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDHDKVMNM
QAKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA
3D structure
PDB8w51 Structure basis of translation regulation by YchF bound to ribosome
ChainW
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna W D45 K83 P84 D45 K83 P84
BS02 rna W R9 Q12 G13 K14 S17 R18 R19 R21 I29 Y31 P37 Q75 Q78 H88 D90 R9 Q12 G13 K14 S17 R18 R19 R21 I29 Y31 P37 Q75 Q78 H88 D90
External links
PDB RCSB:8w51, PDBe:8w51, PDBj:8w51
PDBsum8w51
PubMed
UniProtP68919|RL25_ECOLI Large ribosomal subunit protein bL25 (Gene Name=rplY)

[Back to BioLiP]