Structure of PDB 8t5h Chain W

Receptor sequence

>8t5hW (length=79) Species: 562 (Escherichia coli)

GGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRD
HTLFAKADGKVKFEVKGPKNRKFISIEAE

3D structure

• PDB: 8t5h How Dedicated Ribosomes Translate a Leaderless mRNA.
• Chain: W
• Resolution: 3.3 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	W	K71 P73 N75	K66 P68 N70
BS02	rna	W	S8 R10 N11 G12 R13 D14 S15 E16 K18 R19 L20 V22 K23 R24 F25 S29 V30 L31 I35 R38 Q39 R40 G41 G53 R54 D55 H56 T57 F59 K61 F68 R76	S3 R5 N6 G7 R8 D9 S10 E11 K13 R14 L15 V17 K18 R19 F20 S24 V25 L26 I30 R33 Q34 R35 G36 G48 R49 D50 H51 T52 F54 K56 F63 R71

External links

• PDB: RCSB:8t5h, PDBe:8t5h, PDBj:8t5h
• PDBsum: 8t5h
• PubMed: 38185325
• UniProt: C3SSG7