Structure of PDB 8rw1 Chain W

Receptor sequence

>8rw1W (length=129) Species: 284590 (Kluyveromyces lactis NRRL Y-1140) [Search protein sequence]

TRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFE
YIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIADVEKWTANLLPARQFGY
VILTTSAGIMDHEEAHRKHVSGKILGFVY

3D structure

PDB

8rw1 Structural basis of AUC codon discrimination during translation initiation in yeast.

Chain

Resolution

3.35 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	W	T2 R3 T4 S5 A8 N12 N16 K19 R28 S31 K32 R57 S58 K60 K71 V74 I75 S76 R78 N80 K82 I83 K88 W89 T105 T106 S107 R118 K119 H120 S122 Y130	T1 R2 T3 S4 A7 N11 N15 K18 R27 S30 K31 R56 S57 K59 K70 V73 I74 S75 R77 N79 K81 I82 K87 W88 T104 T105 S106 R117 K118 H119 S121 Y129

External links

PDB	RCSB:8rw1, PDBe:8rw1, PDBj:8rw1
PDBsum	8rw1
PubMed	39193907
UniProt	Q6CW21\|RS22_KLULA Small ribosomal subunit protein uS8 (Gene Name=RPS22)