Structure of PDB 8rpy Chain W

Receptor sequence
>8rpyW (length=75) Species: 562 (Escherichia coli) [Search protein sequence]
RNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLF
AKADGKVKFEVKGPKNRKFISIEAE
3D structure
PDB8rpy Multimodal binding and inhibition of bacterial ribosomes by the antimicrobial peptides Api137 and Api88.
ChainW
Resolution2.64 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna W N8 R10 D11 S12 E13 A14 K15 R16 F22 G23 E25 A29 G30 I32 R37 G38 T39 K40 G50 R51 D52 H53 F56 K58 F65 R73 K74 N2 R4 D5 S6 E7 A8 K9 R10 F16 G17 E19 A23 G24 I26 R31 G32 T33 K34 G44 R45 D46 H47 F50 K52 F59 R67 K68
BS02 rna W P70 N72 P64 N66
External links
PDB RCSB:8rpy, PDBe:8rpy, PDBj:8rpy
PDBsum8rpy
PubMed38730238
UniProtP0A7L8|RL27_ECOLI Large ribosomal subunit protein bL27 (Gene Name=rpmA)

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