Structure of PDB 7oqe Chain W

Receptor sequence
>7oqeW (length=170) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
MKFTPSIVIDAPQYYVDHFNGKYNVDKCVILRDLQLETDSESMPSSLKHL
TKPTHILDLTNNDLIMIPDLSRRDDIHTLLLGRNNIVEVDGRLLPMNVQN
LTLSNNSIRRFEDLQRLRRAPRTLKNLTLIGNQVCHLANYREHVLRLVPH
LETLDFQNVTAEERKSAMSF
3D structure
PDB7oqe Structural insights into how Prp5 proofreads the pre-mRNA branch site.
ChainW
Resolution5.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna W N158 A161 N158 A161
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0030620 U2 snRNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0008380 RNA splicing
GO:1903241 U2-type prespliceosome assembly
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005686 U2 snRNP
GO:0005737 cytoplasm
GO:0071004 U2-type prespliceosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7oqe, PDBe:7oqe, PDBj:7oqe
PDBsum7oqe
PubMed34349264
UniProtQ08963|RU2A_YEAST U2 small nuclear ribonucleoprotein A' (Gene Name=LEA1)

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