Structure of PDB 6ddd Chain W

Receptor sequence
>6dddW (length=112) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
QQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKNAKGDVVK
AVIVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPVARELREG
NFMKIVSLAPEV
3D structure
PDB6ddd cryoEM-Guided Development of Antibiotics for Drug-Resistant Bacteria.
ChainW
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna W E5 T6 I22 K23 L25 S28 K31 K66 R70 Y76 K78 E3 T4 I20 K21 L23 S26 K29 K57 R61 Y67 K69
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ddd, PDBe:6ddd, PDBj:6ddd
PDBsum6ddd
PubMed30667174
UniProtQ2FW16|RL14_STAA8 Large ribosomal subunit protein uL14 (Gene Name=rplN)

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