Structure of PDB 5lmv Chain W

Receptor sequence
>5lmvW (length=71) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
AKEKDTIRTEGVVTEALPNATFRVKLDSGPEILAYISGKMRMHYIRILPG
DRVVVEITPYDPTRGRIVYRK
3D structure
PDB5lmv Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
ChainW
Resolution4.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna W K2 L17 P18 N19 A20 F22 G38 K39 R41 M42 R66 K2 L17 P18 N19 A20 F22 G38 K39 R41 M42 R66
BS02 MG W K4 T6 E56 K4 T6 E56
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003743 translation initiation factor activity
GO:0019843 rRNA binding
GO:0043022 ribosome binding
Biological Process
GO:0006412 translation
GO:0006413 translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5lmv, PDBe:5lmv, PDBj:5lmv
PDBsum5lmv
PubMed27662086
UniProtQ5SHR1|IF1_THET8 Translation initiation factor IF-1 (Gene Name=infA)

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