Structure of PDB 2jes Chain W

Receptor sequence
>2jesW (length=370) Species: 10724 (Bacillus phage SPP1) [Search protein sequence]
PDTTMIQKLIDEHNPEPLLKGVRYYMCENDIEKKRRTYYDAAGQQLVDDT
KTNNRTSHAWHKLFVDQKTQYLVGEPVTFTSDNKTLLEYVNELADDDFDD
ILNETVKNMSNKGIEYWHPFVDEEGEFDYVIFPAEEMIVVYWGRVPIIPF
KNNEEMVSDLKFYKDLIDNYDSITSSTMDSFSDFQQIVYVLKNYDGENPK
EFTANLRYHSVIKVSGDGGVDTLRAEIPVDSAAKELERIQDELYKSAQAV
DNSPETIGGGATGPALEKLYALLDLKANMAERKIRAGLRLFFWFFAEYLR
NTGKGDFNPDKELTMTFTRTRIQNDSEIVQSLVQGVTGGIMSKETAVARN
PFVQDPEEELARIEEEMNQY
3D structure
PDB2jes Structural Framework for DNA Translocation Via the Viral Portal Protein
ChainW
Resolution3.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA W E60 R83 E32 R55
Gene Ontology
Biological Process
GO:0046718 symbiont entry into host cell
GO:0098006 viral DNA genome packaging, headful
GO:0099001 symbiont genome ejection through host cell envelope, long flexible tail mechanism
Cellular Component
GO:0019028 viral capsid
GO:0046729 viral procapsid
GO:0046798 viral portal complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:2jes, PDBe:2jes, PDBj:2jes
PDBsum2jes
PubMed17363899
UniProtP54309|PORTL_BPSPP Portal protein (Gene Name=6)

[Back to BioLiP]