Structure of PDB 5mre Chain VV

Receptor sequence

>5mreVV (length=233) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]

GKGAAKYGFKSGVFPTTRSILKSPTTKQTDIINKVKSPKPKGVLGIGYAK
GVKHPKGSHRLSPKVNFIDVDNLIAKTVAEPQSIKSSNGSAQKVRLQKAE
LRRKFLIEAFRKEEARLLHKHEYLQKRTKELEKAKELELEKLNKEKSSDL
TIMTLDKMMSQPLLRNRSPEESELLKLKRNYNRSLLNFQAHKKKLNELLN
LYHVANEFIVTESQLLKKIDKVFNDETEEFTDA

3D structure

PDB

5mre The structure of the yeast mitochondrial ribosome.

Chain

Resolution

3.75 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	VV	G2 K3 A5 Y8 K11 S12 G13 V14 R19 K23 V36 K37 S59 H60 L62 S63 P64 K65 V66 K77 T78 A80 P82 Q83 G90 A92 Q93 A100 R103 R104 R168 R180 N183 R184 L187	G1 K2 A4 Y7 K10 S11 G12 V13 R18 K22 V35 K36 S58 H59 L61 S62 P63 K64 V65 K76 T77 A79 P81 Q82 G89 A91 Q92 A99 R102 R103 R167 R179 N182 R183 L186

External links

PDB	RCSB:5mre, PDBe:5mre, PDBj:5mre
PDBsum	5mre
PubMed	28154081
UniProt	P17558\|RTPT_YEAST Small ribosomal subunit protein mS26 (Gene Name=PET123)

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