Structure of PDB 6gzx Chain V3

Receptor sequence
>6gzxV3 (length=119) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
NIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPHVE
KKARAEIQVDLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFRERRYVG
KRHSYQGPPPPEVRDLEAL
3D structure
PDB6gzx Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
ChainV3
Resolution4.57 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna V3 K5 L6 I7 G8 I13 R18 R30 Y31 L36 H49 E51 P63 G64 L66 R68 E70 R86 K92 R93 R97 Y99 V100 G101 K102 R103 Q107 K4 L5 I6 G7 I12 R17 R29 Y30 L35 H48 E50 P62 G63 L65 R67 E69 R85 K91 R92 R96 Y98 V99 G100 K101 R102 Q106
Gene Ontology
Biological Process
GO:0044238 primary metabolic process

View graph for
Biological Process
External links
PDB RCSB:6gzx, PDBe:6gzx, PDBj:6gzx
PDBsum6gzx
PubMed30301898
UniProtQ5SIS0

[Back to BioLiP]