Structure of PDB 6gzq Chain V2

Receptor sequence
>6gzqV2 (length=121) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
NIYKLIGRNLEITDAIRDYVEKKLARLDRYQDGELMAKVVLSLAGSPHVE
KKARAEIQVDLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFRERRYVG
KRHSYQGPPPPEVRDLEALRK
3D structure
PDB6gzq Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism.
ChainV2
Resolution3.28 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna V2 K5 L6 I7 R9 I13 R18 R27 S47 P48 H49 V50 E51 P63 G64 R68 E70 K92 R93 E96 Y99 G101 K102 R103 H104 S105 Q107 L117 K4 L5 I6 R8 I12 R17 R26 S46 P47 H48 V49 E50 P62 G63 R67 E69 K91 R92 E95 Y98 G100 K101 R102 H103 S104 Q106 L116
Gene Ontology
Biological Process
GO:0044238 primary metabolic process

View graph for
Biological Process
External links
PDB RCSB:6gzq, PDBe:6gzq, PDBj:6gzq
PDBsum6gzq
PubMed30301898
UniProtQ5SIS0

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