Structure of PDB 8y37 Chain V

Receptor sequence
>8y37V (length=58) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
KQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKPKKVWVSAR
ALKSGKVT
3D structure
PDB8y37 Synthetic macrolides overcoming MLS B K-resistant pathogens.
ChainV
Resolution2.53 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna V K3 R10 S13 T14 G15 N16 R17 R18 S19 H20 L22 N23 T25 K26 R27 R28 W29 N30 A31 N32 Q34 A51 R52 K55 S56 K1 R8 S11 T12 G13 N14 R15 R16 S17 H18 L20 N21 T23 K24 R25 R26 W27 N28 A29 N30 Q32 A49 R50 K53 S54
Gene Ontology
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8y37, PDBe:8y37, PDBj:8y37
PDBsum8y37
PubMed38992047
UniProtP66154|RL28_STAAW Large ribosomal subunit protein bL28 (Gene Name=rpmB)

[Back to BioLiP]