Structure of PDB 7syo Chain V

Receptor sequence
>7syoV (length=100) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
HRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRITTRK
TPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIA
3D structure
PDB7syo Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES.
ChainV
Resolution4.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna V R21 V29 G52 P53 V54 R55 M56 P57 T60 R62 T64 T65 R66 K67 P69 C70 G71 E72 S74 W77 R83 K86 R4 V12 G35 P36 V37 R38 M39 P40 T43 R45 T47 T48 R49 K50 P52 C53 G54 E55 S57 W60 R66 K69
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7syo, PDBe:7syo, PDBj:7syo
PDBsum7syo
PubMed35822879
UniProtG1SIZ2|RS20_RABIT Small ribosomal subunit protein uS10 (Gene Name=RPS20)

[Back to BioLiP]