Structure of PDB 6ir9 Chain V

Receptor sequence

>6ir9V (length=102) Species: 644223 (Komagataella phaffii GS115) [Search protein sequence]

ERACMLCGIVLPGRVFMQNGCPNCDSVLNLRDSDQATVNECTSSSFEGLV
AVGDNEHSWVAKWLRVDRFQPGLYAVRVDGRLPSDIVAALEQYGVYYRPR
DG

3D structure

PDB

6ir9 Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.

Chain

Resolution

3.8 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	ZN	V	C12 C15 C29 C32	C4 C7 C21 C24

Gene Ontology

	Molecular Function
GO:0000993	RNA polymerase II complex binding
GO:0008270	zinc ion binding

	Biological Process
GO:0006325	chromatin organization
GO:0006355	regulation of DNA-templated transcription
GO:0006368	transcription elongation by RNA polymerase II
GO:0034243	regulation of transcription elongation by RNA polymerase II
GO:0140673	transcription elongation-coupled chromatin remodeling

	Cellular Component
GO:0000775	chromosome, centromeric region
GO:0005634	nucleus
GO:0005694	chromosome
GO:0032044	DSIF complex

External links