Structure of PDB 6dnc Chain V

Receptor sequence
>6dncV (length=103) Species: 562 (Escherichia coli) [Search protein sequence]
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIG
VPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITG
ISA
3D structure
PDB6dnc Mechanism of premature translation termination on a sense codon.
ChainV
Resolution3.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna V G8 K10 R68 K71 I74 K76 F77 R79 R80 K81 H82 Y83 K85 Q86 Q87 G88 H89 R90 Q91 G8 K10 R68 K71 I74 K76 F77 R79 R80 K81 H82 Y83 K85 Q86 Q87 G88 H89 R90 Q91
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6dnc, PDBe:6dnc, PDBj:6dnc
PDBsum6dnc
PubMed29941456
UniProtP0AG48|RL21_ECOLI Large ribosomal subunit protein bL21 (Gene Name=rplU)

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