Structure of PDB 5y5s Chain V

Receptor sequence
>5y5sV (length=42) Species: 1050 (Thermochromatium tepidum) [Search protein sequence]
SLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL
3D structure
PDB5y5s Structure of photosynthetic LH1-RC supercomplex at 1.9 angstrom resolution.
ChainV
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 BCL V W28 A35 H36 W24 A31 H32
BS02 BCL V F29 V32 H36 W40 W45 F25 V28 H32 W36 W41
BS03 CRT V F17 I20 F21 S24 M25 F29 F13 I16 F17 S20 M21 F25
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0042314 bacteriochlorophyll binding
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872 metal ion binding
Biological Process
GO:0019684 photosynthesis, light reaction
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0030076 light-harvesting complex
GO:0030077 plasma membrane light-harvesting complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5y5s, PDBe:5y5s, PDBj:5y5s
PDBsum5y5s
PubMed29618814
UniProtD2Z0P1

[Back to BioLiP]