Structure of PDB 5y5s Chain V
Receptor sequence
>5y5sV (length=42) Species:
1050
(Thermochromatium tepidum) [
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SLTGLTDDEAKEFHAIFMQSMYAWFGLVVIAHLLAWLYRPWL
3D structure
PDB
5y5s
Structure of photosynthetic LH1-RC supercomplex at 1.9 angstrom resolution.
Chain
V
Resolution
1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
BCL
V
W28 A35 H36
W24 A31 H32
BS02
BCL
V
F29 V32 H36 W40 W45
F25 V28 H32 W36 W41
BS03
CRT
V
F17 I20 F21 S24 M25 F29
F13 I16 F17 S20 M21 F25
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0042314
bacteriochlorophyll binding
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
GO:0030076
light-harvesting complex
GO:0030077
plasma membrane light-harvesting complex
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5y5s
,
PDBe:5y5s
,
PDBj:5y5s
PDBsum
5y5s
PubMed
29618814
UniProt
D2Z0P1
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