Structure of PDB 5gah Chain V

Receptor sequence
>5gahV (length=102) Species: 562 (Escherichia coli) [Search protein sequence]
AAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKKHQKPVPA
LNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSE
TI
3D structure
PDB5gah Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
ChainV
Resolution3.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna V A2 K4 R6 R7 G16 K17 V28 K33 K43 K44 H45 K47 P48 G57 Q66 S68 N69 R82 F85 K91 K92 K97 A1 K3 R5 R6 G15 K16 V27 K32 K42 K43 H44 K46 P47 G56 Q65 S67 N68 R81 F84 K90 K91 K96
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5gah, PDBe:5gah, PDBj:5gah
PDBsum5gah
PubMed26804923
UniProtP60624|RL24_ECOLI Large ribosomal subunit protein uL24 (Gene Name=rplX)

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