Structure of PDB 5ef2 Chain V

Receptor sequence
>5ef2V (length=70) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence]
TNSDFVVIKALEDGVNVIGLTRGADTRFHHSEKLDKGEVLIAQFTEHTSA
IKVRGKAYIQTRHGVIESEG
3D structure
PDB5ef2 RNA protects a nucleoprotein complex against radiation damage.
ChainV
Resolution1.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna V G18 F32 H34 S35 E36 K37 D39 G14 F28 H30 S31 E32 K33 D35
BS02 TRP V G23 Q47 T49 G19 Q43 T45
BS03 TRP V G27 T30 S53 G23 T26 S49
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
Biological Process
GO:0006353 DNA-templated transcription termination
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5ef2, PDBe:5ef2, PDBj:5ef2
PDBsum5ef2
PubMed27139628
UniProtQ9X6J6|MTRB_GEOSE Transcription attenuation protein MtrB (Gene Name=mtrB)

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