Structure of PDB 2zjr Chain V

Receptor sequence
>2zjrV (length=66) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREV
AQLNTVKAELARKGEQ
3D structure
PDB2zjr Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin.
ChainV
Resolution2.91 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna V P40 H41 R44 R48 A51 Q52 T55 E59 P40 H41 R44 R48 A51 Q52 T55 E59
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2zjr, PDBe:2zjr, PDBj:2zjr
PDBsum2zjr
PubMed18406324
UniProtQ9RXJ4|RL29_DEIRA Large ribosomal subunit protein uL29 (Gene Name=rpmC)

[Back to BioLiP]