Structure of PDB 1rju Chain V

Receptor sequence

>1rjuV (length=36)

HECQCQCGSCKNNEQCQKSCSCPTGCNSDDKCPCGN

3D structure

• PDB: 1rju The Crystal Structure of Yeast Copper Thionein: the solution of a long lasting Enigma.
• Chain: V
• Resolution: 1.44 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CU1	V	C3 C5 C20	C3 C5 C20
BS02	CU1	V	C3 C16	C3 C16
BS03	CU1	V	C5 C10 C22	C5 C10 C22
BS04	CU1	V	C10 C32	C10 C32
BS05	CU1	V	C22 C26 C32	C22 C26 C32
BS06	CU1	V	C20 C22 C34	C20 C22 C34
BS07	CU1	V	C10 C16 C34	C10 C16 C34
BS08	CU1	V	C7 C26	C7 C26

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Tue Feb 18 01:11:29 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)

   1444         else:

=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)

   1446     

   1447     uniprot_line=''

pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '1rju', asym_id = 'V', title = 'The Crystal Structure of Yeast Copper Thionein: the solution of a long lasting Enigma.'

 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='1rju', asym_id='V', title='The Crystal Structure of Yeast Copper Thionein: the solution of a long lasting Enigma.')

    839 

    840     if go:

=>  841         display_go(go,uniprot,pdbid,asym_id)

    842     return pubmed,uniprot

    843 

global display_go = <function display_go>, go = '0005507,0010273,0046870,0046872,0071585', uniprot = '', pdbid = '1rju', asym_id = 'V'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0005507,0010273,0046870,0046872,0071585', uniprot='', pdbid='1rju', asym_id='V')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>