Structure of PDB 6rxx Chain UB

Receptor sequence
>6rxxUB (length=508) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
GSQLKRLKASLREQGLIGPQKSKKQKRQNANDQKAEALKSIREQFNPFQF
KTNARGPKFEVTTNVIKGRPELSRARSEEKRRQTILVEMQRRNKVGGIID
RRTEEEKAAEAAKKLQELEEKRLKRMRGKERLGNFSQVLIHHIAYLGDRF
QPHWFPTLEQLSRHVHSLAKTFPIEVAKAYRMRIQEMEEHRPLAPTVGDL
VILTAIGTTFPTSDHFHQVCTPAMLAIARYLGQKVPAALSDFAVGIYLSI
LALQYQDFAKRYVPEMMNFLLNTLCALAPERAKSKLGNFPVHEPPAGIRI
KDATNTPIRQLNCGDCLRKDELSPAETSSLQIAILSTATAILKSAADTWH
KLPAFIESFQPALSVAQHLLTKPNASHLPSSLTSKLNDLASHLSRLLQLS
RLSRRPLELHHHRPLAIKTYIPKFDPDKHYDPNRERAELAKLKAEHKRER
KGALRELRKDAQFIRREQLRIKKEKDEAYEKKFKRIIAEIQNEEGRAANE
YAREKAAR
3D structure
PDB6rxx Thermophile 90S Pre-ribosome Structures Reveal the Reverse Order of Co-transcriptional 18S rRNA Subdomain Integration.
ChainUB
Resolution7.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna UB I19 G20 P21 Q22 S24 K61 K85 G86 R87 P88 H824 A839 K900 I17 G18 P19 Q20 S22 K51 K67 G68 R69 P70 H429 A444 K505
Gene Ontology
Biological Process
GO:0030490 maturation of SSU-rRNA
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0030692 Noc4p-Nop14p complex
GO:0032040 small-subunit processome

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Biological Process
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Cellular Component
External links
PDB RCSB:6rxx, PDBe:6rxx, PDBj:6rxx
PDBsum6rxx
PubMed31378463
UniProtG0SDW0

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