Structure of PDB 8xjv Chain U

Receptor sequence
>8xjvU (length=123) Species: 8355 (Xenopus laevis) [Search protein sequence]
MAKSAPAPKKGSKKAVTKTQKKDGKKRRKSRKESYAIYVYKVLKQVHPDT
GISSKAMSIMNSFVNDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLL
PGELAKHAVSEGTKAVTKYTSAK
3D structure
PDB8xjv Structural basis for linker histone H5-nucleosome binding and chromatin fiber compaction.
ChainU
Resolution3.6 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna U K1851 A1852 K1859 G1861 K1863 R1864 R1868 K14 A15 K22 G24 K26 R27 R31
BS02 dna U K1846 K1847 G1848 S1849 R1864 R1865 S1891 S1922 T1923 K9 K10 G11 S12 R27 R28 S54 S85 T86
External links
PDB RCSB:8xjv, PDBe:8xjv, PDBj:8xjv
PDBsum8xjv
PubMed39103524
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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