Structure of PDB 8cgu Chain U
Receptor sequence
>8cguU (length=47) Species:
679895
(Escherichia coli BW25113) [
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PVIVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHA
3D structure
PDB
8cgu
Structural conservation of antibiotic interaction with ribosomes.
Chain
U
Resolution
1.89 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
rna
U
E31 R35 K40 P41 T42 R45 K46 A52 V53 K54 R55 H56
E21 R25 K30 P31 T32 R35 K36 A42 V43 K44 R45 H46
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
GO:0019843
rRNA binding
Biological Process
GO:0000028
ribosomal small subunit assembly
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0022627
cytosolic small ribosomal subunit
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8cgu
,
PDBe:8cgu
,
PDBj:8cgu
PDBsum
8cgu
PubMed
37550453
UniProt
P68679
|RS21_ECOLI Small ribosomal subunit protein bS21 (Gene Name=rpsU)
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