Structure of PDB 8a98 Chain U

Receptor sequence
>8a98U (length=112) Species: 347515 (Leishmania major strain Friedlin) [Search protein sequence]
VAVRAKVGSRSYVRQKQLAKGKKVFKIDCSIDVLGNFEQFFQDNTKLNGR
KGKLSDKVRLSMNDNVLTISTTMAYRKKYFKYLTKKFLKKKDLRDWIRIL
ATGKGTYQLKYF
3D structure
PDB8a98 CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT
ChainU
Resolution2.46 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna U V2 A3 R5 K7 V8 V1 A2 R4 K6 V7
BS02 rna U K7 V8 G9 S12 K6 V7 G8 S11
BS03 rna U Q16 K56 G59 K61 R86 K87 Y89 Y92 K96 K99 R108 L110 Q15 K46 G49 K51 R76 K77 Y79 Y82 K86 K89 R98 L100
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:8a98, PDBe:8a98, PDBj:8a98
PDBsum8a98
PubMed38722744
UniProtQ4Q0X2

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