Structure of PDB 8a5q Chain U

Receptor sequence
>8a5qU (length=606) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
KVSERVLAREGLERTDNGMRQTSWPEVQPINQKNYYTDYMKRDDQILSLR
LQNEANRERLVKTAQMDPSKIIVIHPGSQNLRIGFASDALPKTIPMVLGT
QYSQTESEMHEALPRRQFEGRTMEQQYGEEWVKKYQKMCSDLKVTMRANK
LKVLPNSKDLVVNFNRRTEPEIISQHNDPLQVEWTNVNKAPEDGTTQKVF
IGQQALRIAEDSSPKYKLWWPIQHGWLNEDDYPTRAHLFDDLEMLLDRAL
RRELGLTKKADWKQYSCVIVIPDLYDKRYVELLLHLCIEFFDLSRVAFIQ
ESMAATFGAGYTQACVVDVGAQKTSISCVEDGLVIEDSRVNLKYGGYDVT
ETFIKMMLYDNFPYQDINLRRRHDFLLAEELKMKYCTLSQANISVQAFDF
HLRAPNQPTRKYQFKFYDEVILAPMGFYDPSIFDNSTKLRGRRKLIDRSY
NAYDVDMPDDPTSSAQLAILAMVQPSQRSAKEIAAERDAVLPIAPLDVAI
LTSIQHAAKGDEKKVRELVGSIMVVGGGAKIPHFAPFLEEKLKIRRPDLA
DRILVSRSAREMDEQVVVWKGASVFAKLSTNDSWVTNYEYKMLGSRCIYM
KLLWHY
3D structure
PDB8a5q Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
ChainU
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna U N37 Y39 K44 N34 Y36 K41
BS02 ATP U S113 Q114 N115 R117 G355 A356 E414 K417 M418 G668 G669 K671 S78 Q79 N80 R82 G320 A321 E379 K382 M383 G527 G528 K530
Gene Ontology
Biological Process
GO:0006302 double-strand break repair
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0005634 nucleus
GO:0031011 Ino80 complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8a5q, PDBe:8a5q, PDBj:8a5q
PDBsum8a5q
PubMed36490333
UniProtG0S519

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